The EDML format to exchange energy profiles of protein molecular structures

Dariusz Mrozek; Bozena Małysiak-Mrozek; Stanisław Kozielski; Sylwia Górczyńska-Kosiorz

doi:10.1007/978-3-642-04070-2_17

The EDML format to exchange energy profiles of protein molecular structures

Dariusz Mrozek
, Bozena Małysiak-Mrozek
, Stanisław Kozielski
, Sylwia Górczyńska-Kosiorz

Medical University of Silesia in Katowice

Wyniki badań: Rozdział w książce/raport/materiał konferencyjny › Wkład w konferencję › recenzja

2 Cytowania z bazy Scopus

Abstrakt

The Energy Distribution Markup Language (EDML) is an XML-based format that we have designed and developed to exchange protein structure energy profiles between many computers and users. Energy profiles that are distributions of various potential energies over consecutive atoms in protein molecular structures can be downloaded from the Energy Distribution Data Bank (EDB, http://edb.aei.polsl.pl) in the EDML format. In the paper, we describe the purpose of the EDML, a possible use of energy profiles, and internal structure of documents created in the EDML format.

Język oryginału	angielski
Tytuł publikacji goszczącej	Emerging Intelligent Computing Technology and Applications - 5th International Conference on Intelligent Computing, ICIC 2009, Proceedings
Wydawca	Springer Verlag
Strony	146-157
Liczba stron	12
ISBN (drukowany)	3642040691, 9783642040696
Identyfikatory DOI	https://doi.org/10.1007/978-3-642-04070-2_17
Status publikacji	Opublikowano - 2009
Wydarzenie	5th International Conference on Intelligent Computing, ICIC 2009 - Ulsan, Korea, Republika Czas trwania: 16 wrz 2009 → 19 wrz 2009

Seria publikacji

Nazwa	Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Tom	5754 LNCS
ISSN (drukowany)	0302-9743
ISSN (elektroniczny)	1611-3349

Konferencja

Konferencja	5th International Conference on Intelligent Computing, ICIC 2009
Kraj/Terytorium	Korea, Republika
Miejscowość	Ulsan
Okres	16/09/09 → 19/09/09

Obszary tematyczne ASJC Scopus

Informatyka teoretyczna
Informatyka ogólna

Uzyskaj dostęp do dokumentu

10.1007/978-3-642-04070-2_17

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Link do publikacji w Scopus

Cytowanie

Mrozek, D., Małysiak-Mrozek, B., Kozielski, S., & Górczyńska-Kosiorz, S. (2009). The EDML format to exchange energy profiles of protein molecular structures. W Emerging Intelligent Computing Technology and Applications - 5th International Conference on Intelligent Computing, ICIC 2009, Proceedings (str. 146-157). (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Tom 5754 LNCS). Springer Verlag. https://doi.org/10.1007/978-3-642-04070-2_17

Mrozek, Dariusz ; Małysiak-Mrozek, Bozena ; Kozielski, Stanisław i in. / The EDML format to exchange energy profiles of protein molecular structures. Emerging Intelligent Computing Technology and Applications - 5th International Conference on Intelligent Computing, ICIC 2009, Proceedings. Springer Verlag, 2009. str. 146-157 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).

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title = "The EDML format to exchange energy profiles of protein molecular structures",

abstract = "The Energy Distribution Markup Language (EDML) is an XML-based format that we have designed and developed to exchange protein structure energy profiles between many computers and users. Energy profiles that are distributions of various potential energies over consecutive atoms in protein molecular structures can be downloaded from the Energy Distribution Data Bank (EDB, http://edb.aei.polsl.pl) in the EDML format. In the paper, we describe the purpose of the EDML, a possible use of energy profiles, and internal structure of documents created in the EDML format.",

keywords = "Bioinformatics, Databases, Energy profiles, Protein structure, XML",

author = "Dariusz Mrozek and Bozena Ma{\l}ysiak-Mrozek and Stanis{\l}aw Kozielski and Sylwia G{\'o}rczy{\'n}ska-Kosiorz",

year = "2009",

doi = "10.1007/978-3-642-04070-2\_17",

language = "English",

isbn = "3642040691",

series = "Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)",

publisher = "Springer Verlag",

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booktitle = "Emerging Intelligent Computing Technology and Applications - 5th International Conference on Intelligent Computing, ICIC 2009, Proceedings",

address = "Germany",

note = "5th International Conference on Intelligent Computing, ICIC 2009 ; Conference date: 16-09-2009 Through 19-09-2009",

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Mrozek, D , Małysiak-Mrozek, B, Kozielski, S & Górczyńska-Kosiorz, S 2009, The EDML format to exchange energy profiles of protein molecular structures. w Emerging Intelligent Computing Technology and Applications - 5th International Conference on Intelligent Computing, ICIC 2009, Proceedings. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), tom 5754 LNCS, Springer Verlag, str. 146-157, 5th International Conference on Intelligent Computing, ICIC 2009, Ulsan, Korea, Republika, 16/09/09. https://doi.org/10.1007/978-3-642-04070-2_17

The EDML format to exchange energy profiles of protein molecular structures. / Mrozek, Dariusz ; Małysiak-Mrozek, Bozena; Kozielski, Stanisław i in.
Emerging Intelligent Computing Technology and Applications - 5th International Conference on Intelligent Computing, ICIC 2009, Proceedings. Springer Verlag, 2009. str. 146-157 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Tom 5754 LNCS).

Wyniki badań: Rozdział w książce/raport/materiał konferencyjny › Wkład w konferencję › recenzja

TY - GEN

T1 - The EDML format to exchange energy profiles of protein molecular structures

AU - Mrozek, Dariusz

AU - Małysiak-Mrozek, Bozena

AU - Kozielski, Stanisław

AU - Górczyńska-Kosiorz, Sylwia

PY - 2009

Y1 - 2009

N2 - The Energy Distribution Markup Language (EDML) is an XML-based format that we have designed and developed to exchange protein structure energy profiles between many computers and users. Energy profiles that are distributions of various potential energies over consecutive atoms in protein molecular structures can be downloaded from the Energy Distribution Data Bank (EDB, http://edb.aei.polsl.pl) in the EDML format. In the paper, we describe the purpose of the EDML, a possible use of energy profiles, and internal structure of documents created in the EDML format.

AB - The Energy Distribution Markup Language (EDML) is an XML-based format that we have designed and developed to exchange protein structure energy profiles between many computers and users. Energy profiles that are distributions of various potential energies over consecutive atoms in protein molecular structures can be downloaded from the Energy Distribution Data Bank (EDB, http://edb.aei.polsl.pl) in the EDML format. In the paper, we describe the purpose of the EDML, a possible use of energy profiles, and internal structure of documents created in the EDML format.

KW - Bioinformatics

KW - Databases

KW - Energy profiles

KW - Protein structure

KW - XML

UR - https://www.scopus.com/pages/publications/70350430488

U2 - 10.1007/978-3-642-04070-2_17

DO - 10.1007/978-3-642-04070-2_17

M3 - Conference contribution

AN - SCOPUS:70350430488

SN - 3642040691

SN - 9783642040696

T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

SP - 146

EP - 157

BT - Emerging Intelligent Computing Technology and Applications - 5th International Conference on Intelligent Computing, ICIC 2009, Proceedings

PB - Springer Verlag

T2 - 5th International Conference on Intelligent Computing, ICIC 2009

Y2 - 16 September 2009 through 19 September 2009

ER -

Mrozek D , Małysiak-Mrozek B, Kozielski S, Górczyńska-Kosiorz S. The EDML format to exchange energy profiles of protein molecular structures. W Emerging Intelligent Computing Technology and Applications - 5th International Conference on Intelligent Computing, ICIC 2009, Proceedings. Springer Verlag. 2009. str. 146-157. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)). doi: 10.1007/978-3-642-04070-2_17

The EDML format to exchange energy profiles of protein molecular structures

Abstrakt

Seria publikacji

Konferencja

Obszary tematyczne ASJC Scopus

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